Bioconductor Oligo package

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microarray mirna oligo package pdinfobuilder pd.mirna

updated 4.5 years ago by soumyab.g ▴ 10 • written 6.9 years ago by rolan.zauner ▴ 20

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983

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oligo package

updated 5.1 years ago by James W. MacDonald 65k • written 5.1 years ago by cpyadav22 • 0

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933

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oligo package

updated 5.6 years ago by James W. MacDonald 65k • written 5.6 years ago by majeskea • 0

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1.2k

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amazon bioconductor aws s3 oligo package affybatch

6.1 years ago perdedorium • 0

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oligo package Rstudio fatal error microarray CEL

6.5 years ago biostR ▴ 10

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1.7k

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affy oligoclasses oligo package pdinfobuilder annotationdbi

updated 6.8 years ago by James W. MacDonald 65k • written 6.8 years ago by Aedin Culhane ▴ 510

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4.5k

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affy package boxplot hgu133plus2 oligo package

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by Javier Pérez Florido ▴ 840

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1.1k

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pseudoimage oligo affymetrix mouse gene arrays oligo package

updated 7.5 years ago by James W. MacDonald 65k • written 7.5 years ago by Javier Pérez Florido ▴ 840

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Comment: Ensembl plants at annotationHub? by Daniele • 0

Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!

Comment: Numerical differences in DESeq2 output depending on different design matrix cons by swbarnes2 ★ 1.4k

If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?

Comment: DESeq2- Mysterious interaction suppresses DEGs by shaunpeterson • 0

The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…

Comment: STRINGdb : error with string_db$plot_network() by damian.szk ▴ 80

ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …

Comment: STRINGdb : error with string_db$plot_network() by ninidea • 0

> Does the vignette produce the same error? No. Anyway, I finally solved the problem. I don't know why, but I removed: protocol='http' fr…

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Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")

Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools

Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa

Rsubread counting peaks ATACseq

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